Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.59■■□□□ 1.05
PDE6BP35913 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.59■■□□□ 1.05
PDE6BP35913 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDE6BP35913 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
PDE6BP35913 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE6BP35913 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PDE6BP35913 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.58■■□□□ 1.05
PDE6BP35913 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE6BP35913 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.58■■□□□ 1.05
PDE6BP35913 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE6BP35913 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
PDE6BP35913 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDE6BP35913 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PDE6BP35913 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.58■■□□□ 1.05
PDE6BP35913 AC002056.1-201ENST00000395613 760 ntBASIC21.58■■□□□ 1.05
PDE6BP35913 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDE6BP35913 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.58■■□□□ 1.05
PDE6BP35913 AC069262.1-201ENST00000539058 672 ntBASIC21.58■■□□□ 1.05
PDE6BP35913 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.58■■□□□ 1.05
PDE6BP35913 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.58■■□□□ 1.05
PDE6BP35913 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.58■■□□□ 1.05
PDE6BP35913 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDE6BP35913 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDE6BP35913 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDE6BP35913 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.58■■□□□ 1.04
PDE6BP35913 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDE6BP35913 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDE6BP35913 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PDE6BP35913 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PDE6BP35913 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PDE6BP35913 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 AL627223.1-201ENST00000416693 442 ntBASIC21.57■■□□□ 1.04
PDE6BP35913 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.57■■□□□ 1.04
PDE6BP35913 TIMM8BP1-201ENST00000452384 211 ntBASIC21.57■■□□□ 1.04
PDE6BP35913 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.57■■□□□ 1.04
PDE6BP35913 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.57■■□□□ 1.04
PDE6BP35913 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDE6BP35913 AC026120.1-201ENST00000611536 926 ntBASIC21.57■■□□□ 1.04
PDE6BP35913 ACTL9-202ENST00000612068 1252 ntBASIC21.57■■□□□ 1.04
PDE6BP35913 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.57■■□□□ 1.04
PDE6BP35913 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDE6BP35913 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PDE6BP35913 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PDE6BP35913 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.56■■□□□ 1.04
PDE6BP35913 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.56■■□□□ 1.04
PDE6BP35913 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
PDE6BP35913 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.56■■□□□ 1.04
PDE6BP35913 AL390955.2-201ENST00000603032 514 ntBASIC21.56■■□□□ 1.04
PDE6BP35913 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDE6BP35913 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
PDE6BP35913 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.55■■□□□ 1.04
PDE6BP35913 PMS2P4-201ENST00000412466 1052 ntBASIC21.55■■□□□ 1.04
PDE6BP35913 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 FAM86C2P-203ENST00000528684 1004 ntBASIC21.55■■□□□ 1.04
PDE6BP35913 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDE6BP35913 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.55■■□□□ 1.04
PDE6BP35913 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
PDE6BP35913 Z92544.3-201ENST00000624747 417 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms