Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CKS2P33552 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.01□□□□□ -0.33
CKS2P33552 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 AC004951.3-201ENST00000418645 1148 ntBASIC13.01□□□□□ -0.33
CKS2P33552 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.01□□□□□ -0.33
CKS2P33552 POM121L13P-201ENST00000422362 380 ntBASIC13.01□□□□□ -0.33
CKS2P33552 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.01□□□□□ -0.33
CKS2P33552 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.01□□□□□ -0.33
CKS2P33552 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.01□□□□□ -0.33
CKS2P33552 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 UNC93B4-201ENST00000505679 747 ntBASIC13.01□□□□□ -0.33
CKS2P33552 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CKS2P33552 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CKS2P33552 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.01□□□□□ -0.33
CKS2P33552 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.01□□□□□ -0.33
CKS2P33552 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
CKS2P33552 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.01□□□□□ -0.33
CKS2P33552 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.01□□□□□ -0.33
CKS2P33552 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CKS2P33552 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.01□□□□□ -0.33
CKS2P33552 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS2P33552 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CKS2P33552 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CKS2P33552 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13□□□□□ -0.33
CKS2P33552 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13□□□□□ -0.33
CKS2P33552 AC022898.2-201ENST00000616822 1312 ntBASIC13□□□□□ -0.33
CKS2P33552 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 DUTP2-201ENST00000519164 463 ntBASIC13□□□□□ -0.33
CKS2P33552 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13□□□□□ -0.33
CKS2P33552 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13□□□□□ -0.33
CKS2P33552 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13□□□□□ -0.33
CKS2P33552 AC080038.1-201ENST00000611274 1154 ntBASIC13□□□□□ -0.33
CKS2P33552 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC13□□□□□ -0.33
CKS2P33552 MYC-209ENST00000641252 345 ntBASIC13□□□□□ -0.33
CKS2P33552 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CKS2P33552 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 PCDHA1-201ENST00000378133 2726 ntBASIC13□□□□□ -0.33
CKS2P33552 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 AL603756.1-201ENST00000606511 2163 ntBASIC13□□□□□ -0.33
CKS2P33552 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CKS2P33552 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CKS2P33552 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13□□□□□ -0.33
CKS2P33552 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
CKS2P33552 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
CKS2P33552 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CKS2P33552 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.99□□□□□ -0.33
CKS2P33552 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CKS2P33552 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms