Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.93■□□□□ 0.3
PTX3P26022 AC016734.2-201ENST00000624325 1377 ntBASIC16.93■□□□□ 0.3
PTX3P26022 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.93■□□□□ 0.3
PTX3P26022 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PTX3P26022 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 COX5BP2-201ENST00000392354 334 ntBASIC16.93■□□□□ 0.3
PTX3P26022 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.93■□□□□ 0.3
PTX3P26022 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 PCED1CP-201ENST00000419887 785 ntBASIC16.93■□□□□ 0.3
PTX3P26022 CHCHD2P8-201ENST00000429873 447 ntBASIC16.93■□□□□ 0.3
PTX3P26022 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.93■□□□□ 0.3
PTX3P26022 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.93■□□□□ 0.3
PTX3P26022 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.93■□□□□ 0.3
PTX3P26022 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.93■□□□□ 0.3
PTX3P26022 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.93■□□□□ 0.3
PTX3P26022 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.93■□□□□ 0.3
PTX3P26022 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTX3P26022 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.93■□□□□ 0.3
PTX3P26022 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.92■□□□□ 0.3
PTX3P26022 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 AC005104.2-201ENST00000427818 678 ntBASIC16.92■□□□□ 0.3
PTX3P26022 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.92■□□□□ 0.3
PTX3P26022 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.92■□□□□ 0.3
PTX3P26022 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.92■□□□□ 0.3
PTX3P26022 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.92■□□□□ 0.3
PTX3P26022 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PTX3P26022 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTX3P26022 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PTX3P26022 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTX3P26022 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 IER3-202ENST00000376377 1350 ntBASIC16.91■□□□□ 0.3
PTX3P26022 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.91■□□□□ 0.3
PTX3P26022 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 AC125634.1-201ENST00000438758 1403 ntBASIC16.91■□□□□ 0.3
PTX3P26022 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTX3P26022 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms