Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AL928711.1-201ENST00000570165 459 ntBASIC21.27■■□□□ 1
ATP2B4P23634 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.27■■□□□ 1
ATP2B4P23634 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.27■■□□□ 1
ATP2B4P23634 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.27■■□□□ 1
ATP2B4P23634 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP2B4P23634 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ATP2B4P23634 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.27■■□□□ 1
ATP2B4P23634 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
ATP2B4P23634 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.27■■□□□ 1
ATP2B4P23634 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP2B4P23634 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ATP2B4P23634 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP2B4P23634 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.26■□□□□ 0.99
ATP2B4P23634 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.26■□□□□ 0.99
ATP2B4P23634 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP2B4P23634 AC023141.13-201ENST00000604991 943 ntBASIC21.26■□□□□ 0.99
ATP2B4P23634 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.26■□□□□ 0.99
ATP2B4P23634 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ATP2B4P23634 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ATP2B4P23634 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP2B4P23634 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATP2B4P23634 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.25■□□□□ 0.99
ATP2B4P23634 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2B4P23634 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2B4P23634 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2B4P23634 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATP2B4P23634 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2B4P23634 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B4P23634 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2B4P23634 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B4P23634 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP2B4P23634 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B4P23634 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B4P23634 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP2B4P23634 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP2B4P23634 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP2B4P23634 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B4P23634 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATP2B4P23634 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B4P23634 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B4P23634 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ATP2B4P23634 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B4P23634 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2B4P23634 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2B4P23634 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ATP2B4P23634 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2B4P23634 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2B4P23634 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B4P23634 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B4P23634 FAM58CP-201ENST00000435741 640 ntBASIC21.23■□□□□ 0.99
ATP2B4P23634 ACTG1P14-201ENST00000446382 1122 ntBASIC21.23■□□□□ 0.99
ATP2B4P23634 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B4P23634 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms