Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
XPAP23025 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
XPAP23025 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.81■□□□□ 0.44
XPAP23025 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
XPAP23025 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XPAP23025 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XPAP23025 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.81■□□□□ 0.44
XPAP23025 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XPAP23025 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XPAP23025 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XPAP23025 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
XPAP23025 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.8■□□□□ 0.44
XPAP23025 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
XPAP23025 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.8■□□□□ 0.44
XPAP23025 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 AC009949.1-201ENST00000623048 1830 ntBASIC17.8■□□□□ 0.44
XPAP23025 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.8■□□□□ 0.44
XPAP23025 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 AKR1C7P-201ENST00000305623 895 ntBASIC17.8■□□□□ 0.44
XPAP23025 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.8■□□□□ 0.44
XPAP23025 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.8■□□□□ 0.44
XPAP23025 DDX43P3-201ENST00000441064 443 ntBASIC17.8■□□□□ 0.44
XPAP23025 AC122714.2-201ENST00000502787 707 ntBASIC17.8■□□□□ 0.44
XPAP23025 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.8■□□□□ 0.44
XPAP23025 AL121912.1-201ENST00000603683 238 ntBASIC17.8■□□□□ 0.44
XPAP23025 BX276092.7-203ENST00000637198 1536 ntBASIC17.8■□□□□ 0.44
XPAP23025 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
XPAP23025 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
XPAP23025 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.8■□□□□ 0.44
XPAP23025 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.79■□□□□ 0.44
XPAP23025 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.79■□□□□ 0.44
XPAP23025 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.79■□□□□ 0.44
XPAP23025 AC135050.7-201ENST00000624508 2218 ntBASIC17.79■□□□□ 0.44
XPAP23025 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.79■□□□□ 0.44
XPAP23025 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.79■□□□□ 0.44
XPAP23025 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
XPAP23025 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
XPAP23025 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 COX5BP2-201ENST00000392354 334 ntBASIC17.79■□□□□ 0.44
XPAP23025 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 RBM17P3-201ENST00000417687 1192 ntBASIC17.79■□□□□ 0.44
XPAP23025 AC103564.2-201ENST00000432853 1299 ntBASIC17.79■□□□□ 0.44
XPAP23025 ABCD1P5-201ENST00000445663 754 ntBASIC17.79■□□□□ 0.44
XPAP23025 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.79■□□□□ 0.44
XPAP23025 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.79■□□□□ 0.44
XPAP23025 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.79■□□□□ 0.44
XPAP23025 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.79■□□□□ 0.44
XPAP23025 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.79■□□□□ 0.44
XPAP23025 MTDHP3-201ENST00000594186 672 ntBASIC17.79■□□□□ 0.44
XPAP23025 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 AL031008.1-201ENST00000619963 541 ntBASIC17.79■□□□□ 0.44
XPAP23025 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.79■□□□□ 0.44
XPAP23025 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
XPAP23025 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
XPAP23025 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
XPAP23025 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
XPAP23025 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.78■□□□□ 0.44
XPAP23025 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
XPAP23025 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
XPAP23025 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.78■□□□□ 0.44
XPAP23025 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XPAP23025 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XPAP23025 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
XPAP23025 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
XPAP23025 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
XPAP23025 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
XPAP23025 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms