Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHBP21953 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.34■□□□□ 0.37
BCKDHBP21953 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.34■□□□□ 0.37
BCKDHBP21953 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.34■□□□□ 0.37
BCKDHBP21953 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BCKDHBP21953 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHBP21953 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHBP21953 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHBP21953 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHBP21953 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
BCKDHBP21953 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHBP21953 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.33■□□□□ 0.37
BCKDHBP21953 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHBP21953 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.33■□□□□ 0.37
BCKDHBP21953 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHBP21953 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHBP21953 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHBP21953 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
BCKDHBP21953 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHBP21953 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
BCKDHBP21953 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.33■□□□□ 0.36
BCKDHBP21953 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.33■□□□□ 0.36
BCKDHBP21953 BCRP1-201ENST00000444246 691 ntBASIC17.33■□□□□ 0.36
BCKDHBP21953 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.33■□□□□ 0.36
BCKDHBP21953 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.33■□□□□ 0.36
BCKDHBP21953 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.33■□□□□ 0.36
BCKDHBP21953 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.33■□□□□ 0.36
BCKDHBP21953 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.33■□□□□ 0.36
BCKDHBP21953 AC004835.2-201ENST00000603762 682 ntBASIC17.33■□□□□ 0.36
BCKDHBP21953 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.33■□□□□ 0.36
BCKDHBP21953 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.33■□□□□ 0.36
BCKDHBP21953 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.33■□□□□ 0.36
BCKDHBP21953 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.33■□□□□ 0.36
BCKDHBP21953 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
BCKDHBP21953 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
BCKDHBP21953 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BCKDHBP21953 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.33■□□□□ 0.36
BCKDHBP21953 PI4KAP1-204ENST00000612579 1703 ntBASIC17.33■□□□□ 0.36
BCKDHBP21953 BX276092.7-203ENST00000637198 1536 ntBASIC17.32■□□□□ 0.36
BCKDHBP21953 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.32■□□□□ 0.36
BCKDHBP21953 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.32■□□□□ 0.36
BCKDHBP21953 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BCKDHBP21953 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BCKDHBP21953 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BCKDHBP21953 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BCKDHBP21953 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.32■□□□□ 0.36
BCKDHBP21953 AC105339.1-204ENST00000636249 355 ntBASIC17.32■□□□□ 0.36
BCKDHBP21953 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.32■□□□□ 0.36
BCKDHBP21953 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BCKDHBP21953 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BCKDHBP21953 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
BCKDHBP21953 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.32■□□□□ 0.36
BCKDHBP21953 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BCKDHBP21953 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BCKDHBP21953 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHBP21953 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHBP21953 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
BCKDHBP21953 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHBP21953 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHBP21953 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHBP21953 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHBP21953 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHBP21953 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHBP21953 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BCKDHBP21953 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.31■□□□□ 0.36
BCKDHBP21953 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.31■□□□□ 0.36
BCKDHBP21953 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.31■□□□□ 0.36
BCKDHBP21953 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.31■□□□□ 0.36
BCKDHBP21953 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BCKDHBP21953 CXCL1P1-201ENST00000502804 216 ntBASIC17.31■□□□□ 0.36
BCKDHBP21953 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.31■□□□□ 0.36
BCKDHBP21953 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.31■□□□□ 0.36
BCKDHBP21953 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms