Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
ATP4AP20648 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATP4AP20648 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ATP4AP20648 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ATP4AP20648 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP4AP20648 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP4AP20648 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATP4AP20648 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP4AP20648 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ATP4AP20648 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 AC005104.2-201ENST00000427818 678 ntBASIC19.55■□□□□ 0.72
ATP4AP20648 AC098831.1-202ENST00000438821 336 ntBASIC19.55■□□□□ 0.72
ATP4AP20648 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.55■□□□□ 0.72
ATP4AP20648 AC092910.1-201ENST00000482027 1129 ntBASIC19.55■□□□□ 0.72
ATP4AP20648 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.55■□□□□ 0.72
ATP4AP20648 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.55■□□□□ 0.72
ATP4AP20648 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP4AP20648 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP4AP20648 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.55■□□□□ 0.72
ATP4AP20648 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.55■□□□□ 0.72
ATP4AP20648 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ATP4AP20648 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATP4AP20648 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATP4AP20648 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.54■□□□□ 0.72
ATP4AP20648 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 AC073621.1-201ENST00000392730 636 ntBASIC19.54■□□□□ 0.72
ATP4AP20648 LAGE3P1-201ENST00000425356 484 ntBASIC19.54■□□□□ 0.72
ATP4AP20648 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP4AP20648 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP4AP20648 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.54■□□□□ 0.72
ATP4AP20648 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATP4AP20648 AC105339.3-201ENST00000560043 636 ntBASIC19.54■□□□□ 0.72
ATP4AP20648 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.54■□□□□ 0.72
ATP4AP20648 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.54■□□□□ 0.72
ATP4AP20648 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP4AP20648 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATP4AP20648 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATP4AP20648 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP4AP20648 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP4AP20648 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ATP4AP20648 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP4AP20648 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP4AP20648 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP4AP20648 AC003669.1-201ENST00000334569 611 ntBASIC19.53■□□□□ 0.72
ATP4AP20648 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.53■□□□□ 0.72
ATP4AP20648 KLF4P1-201ENST00000412782 1185 ntBASIC19.53■□□□□ 0.72
ATP4AP20648 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.53■□□□□ 0.72
ATP4AP20648 AC002558.1-201ENST00000488906 803 ntBASIC19.53■□□□□ 0.72
ATP4AP20648 AC145285.3-201ENST00000564603 959 ntBASIC19.53■□□□□ 0.72
ATP4AP20648 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.53■□□□□ 0.72
ATP4AP20648 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
ATP4AP20648 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATP4AP20648 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP4AP20648 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
ATP4AP20648 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATP4AP20648 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
ATP4AP20648 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ATP4AP20648 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP4AP20648 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP4AP20648 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP4AP20648 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.52■□□□□ 0.72
ATP4AP20648 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.52■□□□□ 0.72
ATP4AP20648 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATP4AP20648 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
ATP4AP20648 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms