Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC107956.1-201ENST00000494359 873 ntBASIC16.7■□□□□ 0.26
NCK1P16333 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 CD99P1-205ENST00000527459 561 ntBASIC16.7■□□□□ 0.26
NCK1P16333 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.7■□□□□ 0.26
NCK1P16333 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.7■□□□□ 0.26
NCK1P16333 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.7■□□□□ 0.26
NCK1P16333 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.7■□□□□ 0.26
NCK1P16333 AC024243.1-201ENST00000609234 778 ntBASIC16.7■□□□□ 0.26
NCK1P16333 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NCK1P16333 AC005915.1-201ENST00000624912 2018 ntBASIC16.7■□□□□ 0.26
NCK1P16333 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NCK1P16333 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
NCK1P16333 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.69■□□□□ 0.26
NCK1P16333 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 BX088651.1-201ENST00000540551 451 ntBASIC16.69■□□□□ 0.26
NCK1P16333 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.69■□□□□ 0.26
NCK1P16333 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
NCK1P16333 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NCK1P16333 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NCK1P16333 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NCK1P16333 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NCK1P16333 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.68■□□□□ 0.26
NCK1P16333 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
NCK1P16333 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 KRT8P47-201ENST00000604727 1398 ntBASIC16.68■□□□□ 0.26
NCK1P16333 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
NCK1P16333 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NCK1P16333 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.68■□□□□ 0.26
NCK1P16333 AC007663.1-201ENST00000438948 1240 ntBASIC16.68■□□□□ 0.26
NCK1P16333 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.68■□□□□ 0.26
NCK1P16333 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 AC026471.5-201ENST00000615068 467 ntBASIC16.68■□□□□ 0.26
NCK1P16333 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NCK1P16333 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.68■□□□□ 0.26
NCK1P16333 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms