Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PDGFRAP16234 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.52■□□□□ 0.56
PDGFRAP16234 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDGFRAP16234 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDGFRAP16234 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 PRELID1P1-202ENST00000567272 903 ntBASIC18.52■□□□□ 0.56
PDGFRAP16234 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.52■□□□□ 0.56
PDGFRAP16234 Z69720.1-201ENST00000601483 472 ntBASIC18.52■□□□□ 0.56
PDGFRAP16234 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFRAP16234 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFRAP16234 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PDGFRAP16234 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PDGFRAP16234 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFRAP16234 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.52■□□□□ 0.55
PDGFRAP16234 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.52■□□□□ 0.55
PDGFRAP16234 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFRAP16234 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDGFRAP16234 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFRAP16234 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFRAP16234 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFRAP16234 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
PDGFRAP16234 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFRAP16234 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFRAP16234 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFRAP16234 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFRAP16234 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFRAP16234 AC074051.2-201ENST00000565115 352 ntBASIC18.51■□□□□ 0.55
PDGFRAP16234 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFRAP16234 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.51■□□□□ 0.55
PDGFRAP16234 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.51■□□□□ 0.55
PDGFRAP16234 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDGFRAP16234 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFRAP16234 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFRAP16234 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFRAP16234 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDGFRAP16234 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFRAP16234 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDGFRAP16234 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.5■□□□□ 0.55
PDGFRAP16234 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFRAP16234 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.5■□□□□ 0.55
PDGFRAP16234 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.5■□□□□ 0.55
PDGFRAP16234 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.5■□□□□ 0.55
PDGFRAP16234 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PDGFRAP16234 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.5■□□□□ 0.55
PDGFRAP16234 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFRAP16234 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.5■□□□□ 0.55
PDGFRAP16234 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDGFRAP16234 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.5■□□□□ 0.55
PDGFRAP16234 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFRAP16234 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFRAP16234 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFRAP16234 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.49■□□□□ 0.55
PDGFRAP16234 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.49■□□□□ 0.55
PDGFRAP16234 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PDGFRAP16234 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFRAP16234 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms