Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.29■□□□□ 0.84
SCG2P13521 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SCG2P13521 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.29■□□□□ 0.84
SCG2P13521 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.29■□□□□ 0.84
SCG2P13521 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.29■□□□□ 0.84
SCG2P13521 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.29■□□□□ 0.84
SCG2P13521 IGHV3-52-201ENST00000519770 353 ntBASIC20.29■□□□□ 0.84
SCG2P13521 RN7SL510P-201ENST00000581311 263 ntBASIC20.29■□□□□ 0.84
SCG2P13521 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.29■□□□□ 0.84
SCG2P13521 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.29■□□□□ 0.84
SCG2P13521 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCG2P13521 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCG2P13521 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SCG2P13521 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
SCG2P13521 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.28■□□□□ 0.84
SCG2P13521 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.28■□□□□ 0.84
SCG2P13521 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.28■□□□□ 0.84
SCG2P13521 AC132008.2-207ENST00000454517 770 ntBASIC20.28■□□□□ 0.84
SCG2P13521 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.28■□□□□ 0.84
SCG2P13521 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SCG2P13521 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.28■□□□□ 0.84
SCG2P13521 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SCG2P13521 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCG2P13521 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
SCG2P13521 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SCG2P13521 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SCG2P13521 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SCG2P13521 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.27■□□□□ 0.84
SCG2P13521 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.27■□□□□ 0.84
SCG2P13521 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.27■□□□□ 0.84
SCG2P13521 ABCD1P5-201ENST00000445663 754 ntBASIC20.27■□□□□ 0.84
SCG2P13521 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.27■□□□□ 0.84
SCG2P13521 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SCG2P13521 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.27■□□□□ 0.84
SCG2P13521 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.27■□□□□ 0.84
SCG2P13521 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 AP000867.4-201ENST00000641616 219 ntBASIC20.27■□□□□ 0.84
SCG2P13521 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCG2P13521 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.27■□□□□ 0.84
SCG2P13521 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.27■□□□□ 0.83
SCG2P13521 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.27■□□□□ 0.83
SCG2P13521 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.27■□□□□ 0.83
SCG2P13521 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCG2P13521 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCG2P13521 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCG2P13521 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 PMPCAP1-201ENST00000508114 1576 ntBASIC20.26■□□□□ 0.83
SCG2P13521 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.26■□□□□ 0.83
SCG2P13521 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.26■□□□□ 0.83
SCG2P13521 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.26■□□□□ 0.83
SCG2P13521 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.26■□□□□ 0.83
SCG2P13521 MYCLP1-201ENST00000372451 1075 ntBASIC20.26■□□□□ 0.83
SCG2P13521 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.26■□□□□ 0.83
SCG2P13521 STK25P1-201ENST00000585406 838 ntBASIC20.26■□□□□ 0.83
SCG2P13521 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.26■□□□□ 0.83
SCG2P13521 AP001269.4-201ENST00000609611 512 ntBASIC20.26■□□□□ 0.83
SCG2P13521 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SCG2P13521 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.26■□□□□ 0.83
SCG2P13521 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCG2P13521 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms