Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC30.53■■■□□ 2.48
TOP2AP11388 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC30.53■■■□□ 2.48
TOP2AP11388 FLJ13224-201ENST00000313737 1514 ntBASIC30.53■■■□□ 2.48
TOP2AP11388 AC129492.6-201ENST00000611383 1305 ntBASIC30.53■■■□□ 2.48
TOP2AP11388 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TOP2AP11388 HLA-DQB1-201ENST00000374943 1656 ntBASIC30.53■■■□□ 2.48
TOP2AP11388 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC30.52■■■□□ 2.48
TOP2AP11388 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC30.52■■■□□ 2.48
TOP2AP11388 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 AL135744.1-201ENST00000565098 629 ntBASIC30.52■■■□□ 2.48
TOP2AP11388 AJ011932.1-201ENST00000621707 465 ntBASIC30.52■■■□□ 2.48
TOP2AP11388 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC30.52■■■□□ 2.48
TOP2AP11388 USP49-202ENST00000373010 2446 ntTSL 5 BASIC30.52■■■□□ 2.48
TOP2AP11388 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC30.52■■■□□ 2.48
TOP2AP11388 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC30.52■■■□□ 2.48
TOP2AP11388 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC30.52■■■□□ 2.48
TOP2AP11388 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC30.52■■■□□ 2.48
TOP2AP11388 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC30.52■■■□□ 2.48
TOP2AP11388 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
TOP2AP11388 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
TOP2AP11388 PTMS-202ENST00000389462 773 ntTSL 2 BASIC30.52■■■□□ 2.48
TOP2AP11388 AC002056.1-201ENST00000395613 760 ntBASIC30.52■■■□□ 2.48
TOP2AP11388 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TOP2AP11388 RN7SL589P-201ENST00000481268 310 ntBASIC30.52■■■□□ 2.48
TOP2AP11388 AC004449.1-201ENST00000564240 433 ntBASIC30.52■■■□□ 2.48
TOP2AP11388 PRR29-209ENST00000582540 967 ntTSL 2 BASIC30.52■■■□□ 2.48
TOP2AP11388 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
TOP2AP11388 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
TOP2AP11388 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
TOP2AP11388 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.48
TOP2AP11388 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TOP2AP11388 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TOP2AP11388 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC30.51■■■□□ 2.47
TOP2AP11388 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
TOP2AP11388 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TOP2AP11388 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC30.51■■■□□ 2.47
TOP2AP11388 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
TOP2AP11388 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
TOP2AP11388 AQP6-203ENST00000551733 849 ntTSL 3 BASIC30.51■■■□□ 2.47
TOP2AP11388 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC30.51■■■□□ 2.47
TOP2AP11388 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TOP2AP11388 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
TOP2AP11388 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC30.51■■■□□ 2.47
TOP2AP11388 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TOP2AP11388 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TOP2AP11388 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
TOP2AP11388 KRT18P32-201ENST00000424695 1287 ntBASIC30.5■■■□□ 2.47
TOP2AP11388 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC30.5■■■□□ 2.47
TOP2AP11388 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TOP2AP11388 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
TOP2AP11388 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TOP2AP11388 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC30.49■■■□□ 2.47
TOP2AP11388 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 AC067863.1-201ENST00000494933 530 ntBASIC30.49■■■□□ 2.47
TOP2AP11388 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 AC025678.2-201ENST00000562061 970 ntBASIC30.49■■■□□ 2.47
TOP2AP11388 MNT-208ENST00000575394 606 ntTSL 4 BASIC30.49■■■□□ 2.47
TOP2AP11388 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC30.49■■■□□ 2.47
TOP2AP11388 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC30.49■■■□□ 2.47
TOP2AP11388 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC30.49■■■□□ 2.47
TOP2AP11388 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TOP2AP11388 STK4-201ENST00000372801 2038 ntTSL 2 BASIC30.48■■■□□ 2.47
TOP2AP11388 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC30.48■■■□□ 2.47
TOP2AP11388 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC30.48■■■□□ 2.47
TOP2AP11388 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC30.48■■■□□ 2.47
TOP2AP11388 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC30.48■■■□□ 2.47
TOP2AP11388 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TOP2AP11388 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
TOP2AP11388 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC30.48■■■□□ 2.47
TOP2AP11388 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC30.48■■■□□ 2.47
TOP2AP11388 AC069335.1-201ENST00000489972 472 ntBASIC30.48■■■□□ 2.47
TOP2AP11388 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC30.48■■■□□ 2.47
TOP2AP11388 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC30.48■■■□□ 2.47
TOP2AP11388 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TOP2AP11388 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TOP2AP11388 MADD-208ENST00000405573 1823 ntTSL 5 BASIC30.48■■■□□ 2.47
TOP2AP11388 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC30.48■■■□□ 2.47
TOP2AP11388 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TOP2AP11388 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
TOP2AP11388 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TOP2AP11388 SPDYE11-202ENST00000450699 704 ntBASIC30.47■■■□□ 2.47
TOP2AP11388 MMP17-203ENST00000535004 719 ntTSL 3 BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms