Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNB1P11230 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNB1P11230 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNB1P11230 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 AC003669.1-201ENST00000334569 611 ntBASIC17.82■□□□□ 0.44
CHRNB1P11230 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNB1P11230 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHRNB1P11230 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 FAM8A3P-201ENST00000427218 844 ntBASIC17.82■□□□□ 0.44
CHRNB1P11230 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CHRNB1P11230 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNB1P11230 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNB1P11230 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNB1P11230 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 AC096734.2-201ENST00000562054 433 ntBASIC17.82■□□□□ 0.44
CHRNB1P11230 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNB1P11230 AC027612.4-201ENST00000605371 583 ntBASIC17.82■□□□□ 0.44
CHRNB1P11230 AC106028.4-201ENST00000614509 607 ntBASIC17.82■□□□□ 0.44
CHRNB1P11230 AL805961.1-202ENST00000641562 540 ntBASIC17.82■□□□□ 0.44
CHRNB1P11230 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHRNB1P11230 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNB1P11230 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNB1P11230 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 MIR770-201ENST00000390219 98 ntBASIC17.81■□□□□ 0.44
CHRNB1P11230 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 MRPL20P1-201ENST00000400819 433 ntBASIC17.81■□□□□ 0.44
CHRNB1P11230 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNB1P11230 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.81■□□□□ 0.44
CHRNB1P11230 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CHRNB1P11230 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNB1P11230 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.81■□□□□ 0.44
CHRNB1P11230 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNB1P11230 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNB1P11230 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNB1P11230 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB1P11230 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNB1P11230 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNB1P11230 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB1P11230 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHRNB1P11230 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB1P11230 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNB1P11230 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNB1P11230 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNB1P11230 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNB1P11230 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CHRNB1P11230 KRT19P2-202ENST00000557173 1012 ntBASIC17.8■□□□□ 0.44
CHRNB1P11230 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNB1P11230 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNB1P11230 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 AC019129.2-201ENST00000609837 1235 ntBASIC17.8■□□□□ 0.44
CHRNB1P11230 AC010507.1-201ENST00000633895 436 ntBASIC17.8■□□□□ 0.44
CHRNB1P11230 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNB1P11230 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHRNB1P11230 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNB1P11230 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms