Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.53■□□□□ 0.56
RARAP10276 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RARAP10276 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RARAP10276 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RARAP10276 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 AL031133.1-201ENST00000406807 723 ntBASIC18.53■□□□□ 0.56
RARAP10276 FAM210CP-201ENST00000445714 574 ntBASIC18.53■□□□□ 0.56
RARAP10276 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 AL136038.3-201ENST00000561909 1096 ntBASIC18.53■□□□□ 0.56
RARAP10276 AL049597.2-201ENST00000565575 961 ntBASIC18.53■□□□□ 0.56
RARAP10276 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.53■□□□□ 0.56
RARAP10276 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 LINC01451-201ENST00000623792 534 ntBASIC18.53■□□□□ 0.56
RARAP10276 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.53■□□□□ 0.56
RARAP10276 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.53■□□□□ 0.56
RARAP10276 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RARAP10276 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
RARAP10276 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RARAP10276 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.52■□□□□ 0.56
RARAP10276 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RARAP10276 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.52■□□□□ 0.56
RARAP10276 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RARAP10276 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.52■□□□□ 0.56
RARAP10276 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RARAP10276 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.52■□□□□ 0.56
RARAP10276 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.52■□□□□ 0.56
RARAP10276 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.52■□□□□ 0.56
RARAP10276 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
RARAP10276 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.52■□□□□ 0.56
RARAP10276 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RARAP10276 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.52■□□□□ 0.55
RARAP10276 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RARAP10276 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RARAP10276 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RARAP10276 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
RARAP10276 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RARAP10276 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.52■□□□□ 0.55
RARAP10276 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.52■□□□□ 0.55
RARAP10276 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 NKILA-202ENST00000614771 2598 ntBASIC18.51■□□□□ 0.55
RARAP10276 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 TSPY22P-201ENST00000427496 604 ntBASIC18.51■□□□□ 0.55
RARAP10276 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.51■□□□□ 0.55
RARAP10276 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 NTF6B-201ENST00000591913 560 ntBASIC18.51■□□□□ 0.55
RARAP10276 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RARAP10276 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
RARAP10276 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RARAP10276 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RARAP10276 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 AC011676.5-201ENST00000624864 2660 ntBASIC18.5■□□□□ 0.55
RARAP10276 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RARAP10276 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RARAP10276 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms