Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.26■□□□□ 0.67
COL1A2P08123 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
COL1A2P08123 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.26■□□□□ 0.67
COL1A2P08123 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.26■□□□□ 0.67
COL1A2P08123 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A2P08123 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL1A2P08123 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 AC135050.7-201ENST00000624508 2218 ntBASIC19.25■□□□□ 0.67
COL1A2P08123 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A2P08123 MIR1233-2-201ENST00000408138 82 ntBASIC19.25■□□□□ 0.67
COL1A2P08123 MIR1233-1-201ENST00000408722 82 ntBASIC19.25■□□□□ 0.67
COL1A2P08123 AC004832.2-201ENST00000426397 482 ntBASIC19.25■□□□□ 0.67
COL1A2P08123 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A2P08123 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.25■□□□□ 0.67
COL1A2P08123 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.25■□□□□ 0.67
COL1A2P08123 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 MIR4751-201ENST00000578027 74 ntBASIC19.25■□□□□ 0.67
COL1A2P08123 GGTLC5P-201ENST00000617623 998 ntBASIC19.25■□□□□ 0.67
COL1A2P08123 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.25■□□□□ 0.67
COL1A2P08123 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A2P08123 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 AC006116.8-202ENST00000587620 1550 ntBASIC19.25■□□□□ 0.67
COL1A2P08123 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.25■□□□□ 0.67
COL1A2P08123 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.25■□□□□ 0.67
COL1A2P08123 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL1A2P08123 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A2P08123 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 PTCHD3P3-201ENST00000403073 906 ntBASIC19.24■□□□□ 0.67
COL1A2P08123 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.24■□□□□ 0.67
COL1A2P08123 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A2P08123 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.24■□□□□ 0.67
COL1A2P08123 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL1A2P08123 AC002347.1-201ENST00000569543 541 ntBASIC19.24■□□□□ 0.67
COL1A2P08123 AC010654.1-201ENST00000615722 808 ntBASIC19.24■□□□□ 0.67
COL1A2P08123 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
COL1A2P08123 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A2P08123 LINC00304-203ENST00000565008 1864 ntBASIC19.24■□□□□ 0.67
COL1A2P08123 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.24■□□□□ 0.67
COL1A2P08123 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A2P08123 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COL1A2P08123 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.24■□□□□ 0.67
COL1A2P08123 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL1A2P08123 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL1A2P08123 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.23■□□□□ 0.67
COL1A2P08123 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
COL1A2P08123 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.23■□□□□ 0.67
COL1A2P08123 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
COL1A2P08123 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL1A2P08123 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.23■□□□□ 0.67
COL1A2P08123 MRPL20P1-201ENST00000400819 433 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms