Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THBS1P07996 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 AP001094.4-201ENST00000579008 2176 ntBASIC16.24■□□□□ 0.19
THBS1P07996 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
THBS1P07996 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 TSPY22P-201ENST00000427496 604 ntBASIC16.24■□□□□ 0.19
THBS1P07996 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.24■□□□□ 0.19
THBS1P07996 AL136038.3-201ENST00000561909 1096 ntBASIC16.24■□□□□ 0.19
THBS1P07996 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 AC090616.6-201ENST00000582640 721 ntBASIC16.24■□□□□ 0.19
THBS1P07996 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 AL139327.4-201ENST00000612362 153 ntBASIC16.24■□□□□ 0.19
THBS1P07996 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 AC010460.3-201ENST00000511359 1579 ntBASIC16.24■□□□□ 0.19
THBS1P07996 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
THBS1P07996 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
THBS1P07996 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THBS1P07996 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
THBS1P07996 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.23■□□□□ 0.19
THBS1P07996 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
THBS1P07996 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.23■□□□□ 0.19
THBS1P07996 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.23■□□□□ 0.19
THBS1P07996 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.23■□□□□ 0.19
THBS1P07996 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.23■□□□□ 0.19
THBS1P07996 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
THBS1P07996 AL592071.1-201ENST00000611956 408 ntBASIC16.23■□□□□ 0.19
THBS1P07996 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.23■□□□□ 0.19
THBS1P07996 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.23■□□□□ 0.19
THBS1P07996 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.23■□□□□ 0.19
THBS1P07996 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
THBS1P07996 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.23■□□□□ 0.19
THBS1P07996 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
THBS1P07996 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.22■□□□□ 0.19
THBS1P07996 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
THBS1P07996 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.22■□□□□ 0.19
THBS1P07996 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
THBS1P07996 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.22■□□□□ 0.19
THBS1P07996 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms