Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HLA-DOAP06340 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HLA-DOAP06340 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 AC040169.1-201ENST00000565382 521 ntBASIC20.72■□□□□ 0.91
HLA-DOAP06340 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HLA-DOAP06340 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HLA-DOAP06340 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 AC005104.2-201ENST00000427818 678 ntBASIC20.71■□□□□ 0.91
HLA-DOAP06340 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HLA-DOAP06340 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HLA-DOAP06340 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
HLA-DOAP06340 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HLA-DOAP06340 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HLA-DOAP06340 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.7■□□□□ 0.91
HLA-DOAP06340 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOAP06340 AC097637.2-201ENST00000624096 1997 ntBASIC20.7■□□□□ 0.9
HLA-DOAP06340 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HLA-DOAP06340 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.7■□□□□ 0.9
HLA-DOAP06340 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms