Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGCRP04035 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HMGCRP04035 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCRP04035 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCRP04035 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCRP04035 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.8■□□□□ 0.76
HMGCRP04035 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCRP04035 DUTP2-201ENST00000519164 463 ntBASIC19.8■□□□□ 0.76
HMGCRP04035 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGCRP04035 AC109322.1-201ENST00000524499 1264 ntBASIC19.8■□□□□ 0.76
HMGCRP04035 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.8■□□□□ 0.76
HMGCRP04035 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.8■□□□□ 0.76
HMGCRP04035 AC022145.2-201ENST00000598203 171 ntBASIC19.8■□□□□ 0.76
HMGCRP04035 AC068137.2-201ENST00000605408 478 ntBASIC19.8■□□□□ 0.76
HMGCRP04035 REXO1L3P-201ENST00000622202 1288 ntBASIC19.8■□□□□ 0.76
HMGCRP04035 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCRP04035 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCRP04035 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCRP04035 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGCRP04035 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HMGCRP04035 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCRP04035 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.79■□□□□ 0.76
HMGCRP04035 DDX43P3-201ENST00000441064 443 ntBASIC19.79■□□□□ 0.76
HMGCRP04035 FAM86GP-201ENST00000448322 971 ntBASIC19.79■□□□□ 0.76
HMGCRP04035 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.79■□□□□ 0.76
HMGCRP04035 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCRP04035 AC019129.2-201ENST00000609837 1235 ntBASIC19.79■□□□□ 0.76
HMGCRP04035 LINC00628-201ENST00000628516 1289 ntBASIC19.79■□□□□ 0.76
HMGCRP04035 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCRP04035 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
HMGCRP04035 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGCRP04035 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGCRP04035 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCRP04035 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCRP04035 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HMGCRP04035 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HMGCRP04035 AL121761.2-201ENST00000598007 1648 ntBASIC19.78■□□□□ 0.76
HMGCRP04035 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCRP04035 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCRP04035 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HMGCRP04035 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
HMGCRP04035 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.78■□□□□ 0.76
HMGCRP04035 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 AL353135.1-201ENST00000606729 504 ntBASIC19.78■□□□□ 0.76
HMGCRP04035 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGCRP04035 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGCRP04035 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCRP04035 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCRP04035 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
HMGCRP04035 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCRP04035 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCRP04035 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.77■□□□□ 0.76
HMGCRP04035 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCRP04035 AC190387.1-201ENST00000551683 408 ntBASIC19.77■□□□□ 0.76
HMGCRP04035 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGCRP04035 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCRP04035 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
HMGCRP04035 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.77■□□□□ 0.76
HMGCRP04035 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCRP04035 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCRP04035 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGCRP04035 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGCRP04035 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.77■□□□□ 0.75
HMGCRP04035 AC097637.2-201ENST00000624096 1997 ntBASIC19.77■□□□□ 0.75
HMGCRP04035 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HMGCRP04035 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HMGCRP04035 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms