Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ZBED1O96006 AL450487.1-201ENST00000426799 995 ntBASIC18.67■□□□□ 0.58
ZBED1O96006 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
ZBED1O96006 MIR5100-201ENST00000579544 119 ntBASIC18.67■□□□□ 0.58
ZBED1O96006 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.67■□□□□ 0.58
ZBED1O96006 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZBED1O96006 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ZBED1O96006 AC010460.3-201ENST00000511359 1579 ntBASIC18.67■□□□□ 0.58
ZBED1O96006 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 LTB4R2-202ENST00000528054 3092 ntBASIC18.67■□□□□ 0.58
ZBED1O96006 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
ZBED1O96006 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZBED1O96006 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ZBED1O96006 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.66■□□□□ 0.58
ZBED1O96006 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.66■□□□□ 0.58
ZBED1O96006 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.66■□□□□ 0.58
ZBED1O96006 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.66■□□□□ 0.58
ZBED1O96006 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ZBED1O96006 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.66■□□□□ 0.58
ZBED1O96006 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.66■□□□□ 0.58
ZBED1O96006 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.66■□□□□ 0.58
ZBED1O96006 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.66■□□□□ 0.58
ZBED1O96006 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZBED1O96006 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.66■□□□□ 0.58
ZBED1O96006 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZBED1O96006 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZBED1O96006 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZBED1O96006 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.65■□□□□ 0.58
ZBED1O96006 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
ZBED1O96006 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZBED1O96006 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.65■□□□□ 0.58
ZBED1O96006 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.65■□□□□ 0.58
ZBED1O96006 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.65■□□□□ 0.58
ZBED1O96006 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.65■□□□□ 0.58
ZBED1O96006 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.65■□□□□ 0.58
ZBED1O96006 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.65■□□□□ 0.58
ZBED1O96006 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.65■□□□□ 0.58
ZBED1O96006 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZBED1O96006 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZBED1O96006 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZBED1O96006 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZBED1O96006 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZBED1O96006 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.64■□□□□ 0.58
ZBED1O96006 INTS4P1-201ENST00000438455 1935 ntBASIC18.64■□□□□ 0.58
ZBED1O96006 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZBED1O96006 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ZBED1O96006 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZBED1O96006 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZBED1O96006 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.64■□□□□ 0.57
ZBED1O96006 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZBED1O96006 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZBED1O96006 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZBED1O96006 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.64■□□□□ 0.57
ZBED1O96006 FAM220CP-201ENST00000395253 831 ntBASIC18.64■□□□□ 0.57
ZBED1O96006 DDX43P3-201ENST00000441064 443 ntBASIC18.64■□□□□ 0.57
ZBED1O96006 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZBED1O96006 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.64■□□□□ 0.57
ZBED1O96006 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZBED1O96006 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.64■□□□□ 0.57
ZBED1O96006 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.64■□□□□ 0.57
ZBED1O96006 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.64■□□□□ 0.57
ZBED1O96006 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZBED1O96006 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.64■□□□□ 0.57
ZBED1O96006 LINC01711-201ENST00000598340 967 ntBASIC18.64■□□□□ 0.57
ZBED1O96006 AL591684.3-201ENST00000605187 298 ntBASIC18.64■□□□□ 0.57
ZBED1O96006 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms