Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ABCA1O95477 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ABCA1O95477 AP006288.1-201ENST00000446065 395 ntBASIC14.78□□□□□ -0.04
ABCA1O95477 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.78□□□□□ -0.04
ABCA1O95477 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.78□□□□□ -0.04
ABCA1O95477 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.78□□□□□ -0.04
ABCA1O95477 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 LINC00602-201ENST00000629776 2065 ntBASIC14.78□□□□□ -0.04
ABCA1O95477 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 AC009533.2-201ENST00000543664 586 ntBASIC14.78□□□□□ -0.04
ABCA1O95477 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 AC008687.5-201ENST00000593746 558 ntBASIC14.78□□□□□ -0.04
ABCA1O95477 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.78□□□□□ -0.04
ABCA1O95477 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
ABCA1O95477 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ABCA1O95477 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.77□□□□□ -0.04
ABCA1O95477 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.77□□□□□ -0.04
ABCA1O95477 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.77□□□□□ -0.04
ABCA1O95477 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 MIR149-201ENST00000384879 89 ntBASIC14.77□□□□□ -0.04
ABCA1O95477 AC009947.1-201ENST00000444350 727 ntBASIC14.77□□□□□ -0.04
ABCA1O95477 KRT18P2-201ENST00000447938 1258 ntBASIC14.77□□□□□ -0.04
ABCA1O95477 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.77□□□□□ -0.04
ABCA1O95477 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.77□□□□□ -0.04
ABCA1O95477 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
ABCA1O95477 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.77□□□□□ -0.04
ABCA1O95477 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ABCA1O95477 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ABCA1O95477 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.77□□□□□ -0.05
ABCA1O95477 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
ABCA1O95477 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCA1O95477 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
ABCA1O95477 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ABCA1O95477 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCA1O95477 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
ABCA1O95477 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.77□□□□□ -0.05
ABCA1O95477 CNN2P11-201ENST00000429351 262 ntBASIC14.77□□□□□ -0.05
ABCA1O95477 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.77□□□□□ -0.05
ABCA1O95477 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.77□□□□□ -0.05
ABCA1O95477 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.77□□□□□ -0.05
ABCA1O95477 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.77□□□□□ -0.05
ABCA1O95477 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.77□□□□□ -0.05
ABCA1O95477 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.77□□□□□ -0.05
ABCA1O95477 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.77□□□□□ -0.05
ABCA1O95477 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ABCA1O95477 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms