Protein–RNA interactions for Protein: O94788

ALDH1A2, Retinal dehydrogenase 2, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2O94788 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.32■□□□□ 0.52
ALDH1A2O94788 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ALDH1A2O94788 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 RPS2P28-201ENST00000314255 741 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 MIR574-201ENST00000385209 96 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 KRT18P13-201ENST00000400056 1290 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 SCARNA2-201ENST00000458748 420 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 RNA5SP419-201ENST00000515908 135 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 KRT18P58-201ENST00000527480 1120 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 AC009533.2-201ENST00000543664 586 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ALDH1A2O94788 LTB4R2-202ENST00000528054 3092 ntBASIC18.31■□□□□ 0.52
ALDH1A2O94788 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ALDH1A2O94788 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 AC012317.2-201ENST00000623305 2251 ntBASIC18.3■□□□□ 0.52
ALDH1A2O94788 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 RBM17P3-201ENST00000417687 1192 ntBASIC18.3■□□□□ 0.52
ALDH1A2O94788 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 RNPS1P1-201ENST00000507437 918 ntBASIC18.3■□□□□ 0.52
ALDH1A2O94788 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 AL671883.3-201ENST00000603274 991 ntBASIC18.3■□□□□ 0.52
ALDH1A2O94788 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 TP73-AS1-210ENST00000637775 1455 ntBASIC18.3■□□□□ 0.52
ALDH1A2O94788 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.3■□□□□ 0.52
ALDH1A2O94788 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ALDH1A2O94788 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms