Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.88■□□□□ 0.45
USP1O94782 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
USP1O94782 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.88■□□□□ 0.45
USP1O94782 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 CROCCP2-202ENST00000412962 2773 ntBASIC17.88■□□□□ 0.45
USP1O94782 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 HBZP1-201ENST00000354915 429 ntBASIC17.88■□□□□ 0.45
USP1O94782 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 RNF152P1-201ENST00000397754 604 ntBASIC17.88■□□□□ 0.45
USP1O94782 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.88■□□□□ 0.45
USP1O94782 TSPY5P-201ENST00000426936 936 ntBASIC17.88■□□□□ 0.45
USP1O94782 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.88■□□□□ 0.45
USP1O94782 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.88■□□□□ 0.45
USP1O94782 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.88■□□□□ 0.45
USP1O94782 ZNF444P1-201ENST00000559497 298 ntBASIC17.88■□□□□ 0.45
USP1O94782 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USP1O94782 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.88■□□□□ 0.45
USP1O94782 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.88■□□□□ 0.45
USP1O94782 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.88■□□□□ 0.45
USP1O94782 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USP1O94782 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
USP1O94782 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
USP1O94782 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP1O94782 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
USP1O94782 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.87■□□□□ 0.45
USP1O94782 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 AK4P3-201ENST00000418260 669 ntBASIC17.87■□□□□ 0.45
USP1O94782 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.87■□□□□ 0.45
USP1O94782 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.87■□□□□ 0.45
USP1O94782 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.87■□□□□ 0.45
USP1O94782 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.87■□□□□ 0.45
USP1O94782 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.87■□□□□ 0.45
USP1O94782 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
USP1O94782 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
USP1O94782 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.87■□□□□ 0.45
USP1O94782 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 AL353692.3-201ENST00000407031 1396 ntBASIC17.87■□□□□ 0.45
USP1O94782 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.87■□□□□ 0.45
USP1O94782 AD000864.1-201ENST00000624076 2295 ntBASIC17.87■□□□□ 0.45
USP1O94782 BX276092.7-203ENST00000637198 1536 ntBASIC17.87■□□□□ 0.45
USP1O94782 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP1O94782 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
USP1O94782 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
USP1O94782 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 KRT18P38-201ENST00000449496 1282 ntBASIC17.86■□□□□ 0.45
USP1O94782 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.86■□□□□ 0.45
USP1O94782 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
USP1O94782 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.86■□□□□ 0.45
USP1O94782 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.86■□□□□ 0.45
USP1O94782 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.86■□□□□ 0.45
USP1O94782 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.86■□□□□ 0.45
USP1O94782 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 GPR32P1-201ENST00000601788 811 ntBASIC17.86■□□□□ 0.45
USP1O94782 AL445228.2-201ENST00000605589 952 ntBASIC17.86■□□□□ 0.45
USP1O94782 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
USP1O94782 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
USP1O94782 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
USP1O94782 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms