Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM3O75382 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 AC093677.2-201ENST00000600169 1863 ntBASIC16.48■□□□□ 0.23
TRIM3O75382 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM3O75382 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
TRIM3O75382 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRIM3O75382 AL845331.1-201ENST00000424978 1190 ntBASIC16.48■□□□□ 0.23
TRIM3O75382 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 AP000867.3-201ENST00000524675 377 ntBASIC16.48■□□□□ 0.23
TRIM3O75382 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 AC009154.2-201ENST00000621177 724 ntBASIC16.48■□□□□ 0.23
TRIM3O75382 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM3O75382 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM3O75382 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM3O75382 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM3O75382 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 PCDHA12-202ENST00000613593 2588 ntBASIC16.47■□□□□ 0.23
TRIM3O75382 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
TRIM3O75382 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 AC246785.2-201ENST00000432512 513 ntBASIC16.47■□□□□ 0.23
TRIM3O75382 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM3O75382 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM3O75382 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM3O75382 AC012615.1-201ENST00000565797 1299 ntBASIC16.47■□□□□ 0.23
TRIM3O75382 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM3O75382 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.47■□□□□ 0.23
TRIM3O75382 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM3O75382 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM3O75382 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM3O75382 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM3O75382 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM3O75382 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.46■□□□□ 0.23
TRIM3O75382 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM3O75382 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM3O75382 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM3O75382 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms