Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 IGHV3-47-201ENST00000425060 335 ntBASIC16.96■□□□□ 0.31
PRAMEF4O60810 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 AL139327.4-201ENST00000612362 153 ntBASIC16.96■□□□□ 0.31
PRAMEF4O60810 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.96■□□□□ 0.31
PRAMEF4O60810 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRAMEF4O60810 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF4O60810 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF4O60810 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.96■□□□□ 0.3
PRAMEF4O60810 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.96■□□□□ 0.3
PRAMEF4O60810 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF4O60810 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.96■□□□□ 0.3
PRAMEF4O60810 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF4O60810 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PRAMEF4O60810 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 AC002558.1-201ENST00000488906 803 ntBASIC16.95■□□□□ 0.3
PRAMEF4O60810 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 AC122714.2-201ENST00000502787 707 ntBASIC16.95■□□□□ 0.3
PRAMEF4O60810 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 AC109462.3-201ENST00000573934 613 ntBASIC16.95■□□□□ 0.3
PRAMEF4O60810 BNIP3P18-201ENST00000593976 575 ntBASIC16.95■□□□□ 0.3
PRAMEF4O60810 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRAMEF4O60810 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRAMEF4O60810 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 AC011467.2-201ENST00000598425 242 ntBASIC16.94■□□□□ 0.3
PRAMEF4O60810 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.94■□□□□ 0.3
PRAMEF4O60810 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRAMEF4O60810 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms