Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF9O60383 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.07■□□□□ 0.32
GDF9O60383 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF9O60383 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 DDX43P3-201ENST00000441064 443 ntBASIC17.07■□□□□ 0.32
GDF9O60383 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.07■□□□□ 0.32
GDF9O60383 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF9O60383 AL359881.2-201ENST00000602973 570 ntBASIC17.07■□□□□ 0.32
GDF9O60383 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.07■□□□□ 0.32
GDF9O60383 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.07■□□□□ 0.32
GDF9O60383 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
GDF9O60383 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GDF9O60383 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GDF9O60383 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.06■□□□□ 0.32
GDF9O60383 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
GDF9O60383 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
GDF9O60383 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 TUBB3P1-201ENST00000405796 1332 ntBASIC17.06■□□□□ 0.32
GDF9O60383 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.06■□□□□ 0.32
GDF9O60383 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 AC112191.1-201ENST00000523689 701 ntBASIC17.06■□□□□ 0.32
GDF9O60383 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.06■□□□□ 0.32
GDF9O60383 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.06■□□□□ 0.32
GDF9O60383 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 ESPNP-201ENST00000270691 2015 ntBASIC17.06■□□□□ 0.32
GDF9O60383 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GDF9O60383 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 AC097637.2-201ENST00000624096 1997 ntBASIC17.06■□□□□ 0.32
GDF9O60383 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
GDF9O60383 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GDF9O60383 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
GDF9O60383 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.05■□□□□ 0.32
GDF9O60383 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF9O60383 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.05■□□□□ 0.32
GDF9O60383 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF9O60383 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF9O60383 AC022494.1-201ENST00000466044 728 ntBASIC17.05■□□□□ 0.32
GDF9O60383 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 KRT8P48-201ENST00000515599 1220 ntBASIC17.05■□□□□ 0.32
GDF9O60383 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.05■□□□□ 0.32
GDF9O60383 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 AL353135.1-201ENST00000606729 504 ntBASIC17.05■□□□□ 0.32
GDF9O60383 AC026120.1-201ENST00000611536 926 ntBASIC17.05■□□□□ 0.32
GDF9O60383 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.05■□□□□ 0.32
GDF9O60383 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GDF9O60383 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GDF9O60383 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF9O60383 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms