Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 IGLL3P-201ENST00000412472 434 ntBASIC22.54■■□□□ 1.2
KCNQ3O43525 VN2R19P-201ENST00000442399 1052 ntBASIC22.54■■□□□ 1.2
KCNQ3O43525 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.54■■□□□ 1.2
KCNQ3O43525 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.54■■□□□ 1.2
KCNQ3O43525 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.54■■□□□ 1.2
KCNQ3O43525 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.54■■□□□ 1.2
KCNQ3O43525 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
KCNQ3O43525 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KCNQ3O43525 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.53■■□□□ 1.2
KCNQ3O43525 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC22.53■■□□□ 1.2
KCNQ3O43525 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
KCNQ3O43525 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.53■■□□□ 1.2
KCNQ3O43525 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
KCNQ3O43525 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.53■■□□□ 1.2
KCNQ3O43525 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
KCNQ3O43525 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.53■■□□□ 1.2
KCNQ3O43525 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.53■■□□□ 1.2
KCNQ3O43525 AL513190.1-201ENST00000621254 727 ntBASIC22.53■■□□□ 1.2
KCNQ3O43525 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.53■■□□□ 1.2
KCNQ3O43525 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
KCNQ3O43525 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
KCNQ3O43525 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.52■■□□□ 1.2
KCNQ3O43525 MIR4751-201ENST00000578027 74 ntBASIC22.52■■□□□ 1.2
KCNQ3O43525 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.52■■□□□ 1.2
KCNQ3O43525 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KCNQ3O43525 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNQ3O43525 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
KCNQ3O43525 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNQ3O43525 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNQ3O43525 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNQ3O43525 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNQ3O43525 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
KCNQ3O43525 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.51■■□□□ 1.19
KCNQ3O43525 CRYGEP-201ENST00000412192 528 ntBASIC22.51■■□□□ 1.19
KCNQ3O43525 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.51■■□□□ 1.19
KCNQ3O43525 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.51■■□□□ 1.19
KCNQ3O43525 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.51■■□□□ 1.19
KCNQ3O43525 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNQ3O43525 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
KCNQ3O43525 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
KCNQ3O43525 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
KCNQ3O43525 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
KCNQ3O43525 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNQ3O43525 AL354751.1-201ENST00000412768 1863 ntBASIC22.5■■□□□ 1.19
KCNQ3O43525 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNQ3O43525 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 RPS8P6-201ENST00000426177 609 ntBASIC22.5■■□□□ 1.19
KCNQ3O43525 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNQ3O43525 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.5■■□□□ 1.19
KCNQ3O43525 AL805961.1-202ENST00000641562 540 ntBASIC22.5■■□□□ 1.19
KCNQ3O43525 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNQ3O43525 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC22.5■■□□□ 1.19
KCNQ3O43525 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.5■■□□□ 1.19
KCNQ3O43525 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KCNQ3O43525 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.5■■□□□ 1.19
KCNQ3O43525 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
KCNQ3O43525 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms