Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSI1O43347 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.32■□□□□ 0.52
MSI1O43347 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.31■□□□□ 0.52
MSI1O43347 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.31■□□□□ 0.52
MSI1O43347 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 PMPCAP1-201ENST00000508114 1576 ntBASIC18.31■□□□□ 0.52
MSI1O43347 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.31■□□□□ 0.52
MSI1O43347 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.31■□□□□ 0.52
MSI1O43347 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 AC103564.2-201ENST00000432853 1299 ntBASIC18.31■□□□□ 0.52
MSI1O43347 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.31■□□□□ 0.52
MSI1O43347 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.31■□□□□ 0.52
MSI1O43347 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.31■□□□□ 0.52
MSI1O43347 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.31■□□□□ 0.52
MSI1O43347 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.31■□□□□ 0.52
MSI1O43347 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MSI1O43347 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.31■□□□□ 0.52
MSI1O43347 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSI1O43347 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
MSI1O43347 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.3■□□□□ 0.52
MSI1O43347 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 BCL2-203ENST00000589955 5011 ntBASIC18.3■□□□□ 0.52
MSI1O43347 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.3■□□□□ 0.52
MSI1O43347 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 MRPL3P1-201ENST00000400109 1033 ntBASIC18.3■□□□□ 0.52
MSI1O43347 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 SART3-203ENST00000546611 1184 ntBASIC18.3■□□□□ 0.52
MSI1O43347 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
MSI1O43347 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.3■□□□□ 0.52
MSI1O43347 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 AC073592.5-201ENST00000624854 528 ntBASIC18.3■□□□□ 0.52
MSI1O43347 AC067852.2-201ENST00000590513 2313 ntBASIC18.3■□□□□ 0.52
MSI1O43347 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 AC132938.5-201ENST00000624980 1813 ntBASIC18.3■□□□□ 0.52
MSI1O43347 AC134043.2-201ENST00000624206 2238 ntBASIC18.3■□□□□ 0.52
MSI1O43347 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MSI1O43347 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 AL355312.1-201ENST00000407115 2176 ntBASIC18.3■□□□□ 0.52
MSI1O43347 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSI1O43347 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.29■□□□□ 0.52
MSI1O43347 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.29■□□□□ 0.52
MSI1O43347 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 AL353593.2-201ENST00000602529 1483 ntBASIC18.29■□□□□ 0.52
MSI1O43347 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSI1O43347 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
MSI1O43347 SLC25A6P5-201ENST00000435663 894 ntBASIC18.29■□□□□ 0.52
MSI1O43347 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.29■□□□□ 0.52
MSI1O43347 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.29■□□□□ 0.52
MSI1O43347 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.29■□□□□ 0.52
MSI1O43347 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.29■□□□□ 0.52
MSI1O43347 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.29■□□□□ 0.52
MSI1O43347 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.29■□□□□ 0.52
MSI1O43347 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.29■□□□□ 0.52
MSI1O43347 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms