Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ABCC4O15439 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ABCC4O15439 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
ABCC4O15439 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.4■■□□□ 1.18
ABCC4O15439 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ABCC4O15439 AP005117.1-201ENST00000584346 1413 ntBASIC22.39■■□□□ 1.18
ABCC4O15439 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.39■■□□□ 1.18
ABCC4O15439 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ABCC4O15439 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.18
ABCC4O15439 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ABCC4O15439 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ABCC4O15439 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
ABCC4O15439 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.39■■□□□ 1.18
ABCC4O15439 AC002558.1-201ENST00000488906 803 ntBASIC22.39■■□□□ 1.18
ABCC4O15439 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.39■■□□□ 1.18
ABCC4O15439 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.39■■□□□ 1.18
ABCC4O15439 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.18
ABCC4O15439 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ABCC4O15439 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.39■■□□□ 1.17
ABCC4O15439 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
ABCC4O15439 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.39■■□□□ 1.17
ABCC4O15439 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ABCC4O15439 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.38■■□□□ 1.17
ABCC4O15439 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC22.38■■□□□ 1.17
ABCC4O15439 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ABCC4O15439 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.38■■□□□ 1.17
ABCC4O15439 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 FABP5-202ENST00000396359 986 ntTSL 5 BASIC22.38■■□□□ 1.17
ABCC4O15439 MIR940-201ENST00000401276 94 ntBASIC22.38■■□□□ 1.17
ABCC4O15439 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC22.38■■□□□ 1.17
ABCC4O15439 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.38■■□□□ 1.17
ABCC4O15439 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ABCC4O15439 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.38■■□□□ 1.17
ABCC4O15439 TERC-201ENST00000602385 541 ntBASIC22.38■■□□□ 1.17
ABCC4O15439 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
ABCC4O15439 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ABCC4O15439 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ABCC4O15439 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.37■■□□□ 1.17
ABCC4O15439 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.37■■□□□ 1.17
ABCC4O15439 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 AL049757.1-201ENST00000616842 1596 ntBASIC22.37■■□□□ 1.17
ABCC4O15439 PMS2P7-201ENST00000506558 1336 ntBASIC22.37■■□□□ 1.17
ABCC4O15439 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
ABCC4O15439 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.37■■□□□ 1.17
ABCC4O15439 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC22.37■■□□□ 1.17
ABCC4O15439 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
ABCC4O15439 SIRPAP1-201ENST00000448467 1770 ntBASIC22.37■■□□□ 1.17
ABCC4O15439 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC22.37■■□□□ 1.17
ABCC4O15439 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ABCC4O15439 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.37■■□□□ 1.17
ABCC4O15439 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.36■■□□□ 1.17
ABCC4O15439 AL138688.1-201ENST00000624851 1594 ntBASIC22.36■■□□□ 1.17
ABCC4O15439 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ABCC4O15439 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 RPS2P1-201ENST00000434010 821 ntBASIC22.36■■□□□ 1.17
ABCC4O15439 ABCD1P5-201ENST00000445663 754 ntBASIC22.36■■□□□ 1.17
ABCC4O15439 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
ABCC4O15439 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.36■■□□□ 1.17
ABCC4O15439 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ABCC4O15439 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.36■■□□□ 1.17
ABCC4O15439 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
ABCC4O15439 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ABCC4O15439 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.36■■□□□ 1.17
ABCC4O15439 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ABCC4O15439 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.35■■□□□ 1.17
ABCC4O15439 IGHV3-22-201ENST00000520721 359 ntBASIC22.35■■□□□ 1.17
ABCC4O15439 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.35■■□□□ 1.17
ABCC4O15439 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.35■■□□□ 1.17
ABCC4O15439 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ABCC4O15439 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms