Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.64■□□□□ 0.41
MID1O15344 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
MID1O15344 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MID1O15344 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 AC073621.1-201ENST00000392730 636 ntBASIC17.63■□□□□ 0.41
MID1O15344 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.63■□□□□ 0.41
MID1O15344 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 AC009947.1-201ENST00000444350 727 ntBASIC17.63■□□□□ 0.41
MID1O15344 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MID1O15344 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 FAM197Y3-203ENST00000618346 717 ntBASIC17.63■□□□□ 0.41
MID1O15344 AL589182.2-201ENST00000619332 1049 ntBASIC17.63■□□□□ 0.41
MID1O15344 AC005593.1-201ENST00000624894 515 ntBASIC17.63■□□□□ 0.41
MID1O15344 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.63■□□□□ 0.41
MID1O15344 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
MID1O15344 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.63■□□□□ 0.41
MID1O15344 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.63■□□□□ 0.41
MID1O15344 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MID1O15344 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.63■□□□□ 0.41
MID1O15344 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MID1O15344 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.62■□□□□ 0.41
MID1O15344 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
MID1O15344 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.62■□□□□ 0.41
MID1O15344 BX842568.4-201ENST00000421222 227 ntBASIC17.62■□□□□ 0.41
MID1O15344 AL591424.1-201ENST00000442569 1213 ntBASIC17.62■□□□□ 0.41
MID1O15344 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
MID1O15344 SIGLEC30P-201ENST00000455569 941 ntBASIC17.62■□□□□ 0.41
MID1O15344 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 STK19B-204ENST00000512515 211 ntBASIC17.62■□□□□ 0.41
MID1O15344 AC136632.2-201ENST00000512891 861 ntBASIC17.62■□□□□ 0.41
MID1O15344 PGAM5P1-201ENST00000518923 814 ntBASIC17.62■□□□□ 0.41
MID1O15344 IGHV3-52-201ENST00000519770 353 ntBASIC17.62■□□□□ 0.41
MID1O15344 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.62■□□□□ 0.41
MID1O15344 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.62■□□□□ 0.41
MID1O15344 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.62■□□□□ 0.41
MID1O15344 AC139530.3-201ENST00000620344 690 ntBASIC17.62■□□□□ 0.41
MID1O15344 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 FLJ13224-201ENST00000313737 1514 ntBASIC17.62■□□□□ 0.41
MID1O15344 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MID1O15344 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.62■□□□□ 0.41
MID1O15344 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MID1O15344 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.61■□□□□ 0.41
MID1O15344 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MID1O15344 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms