Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ATP2A1O14983 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATP2A1O14983 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATP2A1O14983 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ATP2A1O14983 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
ATP2A1O14983 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.82
ATP2A1O14983 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ATP2A1O14983 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ATP2A1O14983 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
ATP2A1O14983 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.14■□□□□ 0.81
ATP2A1O14983 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP2A1O14983 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP2A1O14983 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ATP2A1O14983 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 AC009336.1-201ENST00000608941 1553 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 KRT18P55-202ENST00000578578 1546 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.14■□□□□ 0.81
ATP2A1O14983 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
ATP2A1O14983 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 DNAJB3-201ENST00000446806 729 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.14■□□□□ 0.81
ATP2A1O14983 IGHV3-52-201ENST00000519770 353 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 IGHV3-65-201ENST00000523210 341 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 AC008667.4-201ENST00000607370 168 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.14■□□□□ 0.81
ATP2A1O14983 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.14■□□□□ 0.81
ATP2A1O14983 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ATP2A1O14983 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATP2A1O14983 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.13■□□□□ 0.81
ATP2A1O14983 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.13■□□□□ 0.81
ATP2A1O14983 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ATP2A1O14983 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.13■□□□□ 0.81
ATP2A1O14983 STK19B-204ENST00000512515 211 ntBASIC20.13■□□□□ 0.81
ATP2A1O14983 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.13■□□□□ 0.81
ATP2A1O14983 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.13■□□□□ 0.81
ATP2A1O14983 AC055717.3-201ENST00000622967 595 ntBASIC20.13■□□□□ 0.81
ATP2A1O14983 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATP2A1O14983 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ATP2A1O14983 REXO1L9P-201ENST00000604264 2108 ntBASIC20.12■□□□□ 0.81
ATP2A1O14983 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP2A1O14983 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ATP2A1O14983 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ATP2A1O14983 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ATP2A1O14983 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP2A1O14983 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.12■□□□□ 0.81
ATP2A1O14983 AC092183.1-201ENST00000469884 875 ntBASIC20.12■□□□□ 0.81
ATP2A1O14983 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
ATP2A1O14983 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.12■□□□□ 0.81
ATP2A1O14983 AC002347.1-201ENST00000569543 541 ntBASIC20.12■□□□□ 0.81
ATP2A1O14983 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.12■□□□□ 0.81
ATP2A1O14983 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.12■□□□□ 0.81
ATP2A1O14983 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.12■□□□□ 0.81
ATP2A1O14983 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.12■□□□□ 0.81
ATP2A1O14983 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 AP000997.3-201ENST00000623333 2250 ntBASIC20.12■□□□□ 0.81
ATP2A1O14983 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP2A1O14983 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.12■□□□□ 0.81
ATP2A1O14983 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ATP2A1O14983 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.12■□□□□ 0.81
ATP2A1O14983 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms