Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.66■□□□□ 0.42
COPEO14579 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.66■□□□□ 0.42
COPEO14579 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.66■□□□□ 0.42
COPEO14579 PVRIG2P-201ENST00000435460 978 ntBASIC17.66■□□□□ 0.42
COPEO14579 AC113404.2-201ENST00000507884 177 ntBASIC17.66■□□□□ 0.42
COPEO14579 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.66■□□□□ 0.42
COPEO14579 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.66■□□□□ 0.42
COPEO14579 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.66■□□□□ 0.42
COPEO14579 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
COPEO14579 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COPEO14579 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COPEO14579 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 KRT8P47-201ENST00000604727 1398 ntBASIC17.66■□□□□ 0.42
COPEO14579 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPEO14579 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.65■□□□□ 0.42
COPEO14579 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.65■□□□□ 0.42
COPEO14579 AC098590.1-201ENST00000468126 897 ntBASIC17.65■□□□□ 0.42
COPEO14579 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
COPEO14579 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.65■□□□□ 0.42
COPEO14579 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.65■□□□□ 0.42
COPEO14579 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 AC060834.1-201ENST00000443027 2032 ntBASIC17.65■□□□□ 0.42
COPEO14579 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.65■□□□□ 0.42
COPEO14579 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPEO14579 AGGF1P2-201ENST00000426656 2106 ntBASIC17.65■□□□□ 0.42
COPEO14579 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.65■□□□□ 0.42
COPEO14579 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPEO14579 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
COPEO14579 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COPEO14579 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
COPEO14579 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
COPEO14579 MIR1238-201ENST00000408483 83 ntBASIC17.64■□□□□ 0.41
COPEO14579 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 KRT18P65-201ENST00000439811 1286 ntBASIC17.64■□□□□ 0.41
COPEO14579 GCSHP5-201ENST00000443090 522 ntBASIC17.64■□□□□ 0.41
COPEO14579 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.64■□□□□ 0.41
COPEO14579 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.64■□□□□ 0.41
COPEO14579 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
COPEO14579 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.64■□□□□ 0.41
COPEO14579 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.64■□□□□ 0.41
COPEO14579 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COPEO14579 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms