Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.61■□□□□ 0.57
SOX1O00570 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.61■□□□□ 0.57
SOX1O00570 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.61■□□□□ 0.57
SOX1O00570 AC140912.1-201ENST00000577171 1054 ntBASIC18.61■□□□□ 0.57
SOX1O00570 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SOX1O00570 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.61■□□□□ 0.57
SOX1O00570 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SOX1O00570 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SOX1O00570 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SOX1O00570 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOX1O00570 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SOX1O00570 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.6■□□□□ 0.57
SOX1O00570 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.6■□□□□ 0.57
SOX1O00570 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.6■□□□□ 0.57
SOX1O00570 AC119751.2-201ENST00000504529 210 ntBASIC18.6■□□□□ 0.57
SOX1O00570 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.6■□□□□ 0.57
SOX1O00570 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.6■□□□□ 0.57
SOX1O00570 AC019129.2-201ENST00000609837 1235 ntBASIC18.6■□□□□ 0.57
SOX1O00570 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.6■□□□□ 0.57
SOX1O00570 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
SOX1O00570 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.6■□□□□ 0.57
SOX1O00570 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SOX1O00570 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SOX1O00570 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.6■□□□□ 0.57
SOX1O00570 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SOX1O00570 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 AC007541.1-201ENST00000570282 1469 ntBASIC18.59■□□□□ 0.57
SOX1O00570 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SOX1O00570 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SOX1O00570 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.59■□□□□ 0.57
SOX1O00570 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.59■□□□□ 0.57
SOX1O00570 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.59■□□□□ 0.57
SOX1O00570 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.59■□□□□ 0.57
SOX1O00570 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SOX1O00570 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.59■□□□□ 0.57
SOX1O00570 MIR4453-201ENST00000584019 89 ntBASIC18.59■□□□□ 0.57
SOX1O00570 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SOX1O00570 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
SOX1O00570 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX1O00570 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SOX1O00570 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SOX1O00570 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SOX1O00570 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SOX1O00570 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.58■□□□□ 0.57
SOX1O00570 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.58■□□□□ 0.57
SOX1O00570 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX1O00570 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX1O00570 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SOX1O00570 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX1O00570 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SOX1O00570 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SOX1O00570 AC106886.1-201ENST00000568660 600 ntBASIC18.58■□□□□ 0.56
SOX1O00570 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.58■□□□□ 0.56
SOX1O00570 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.58■□□□□ 0.56
SOX1O00570 AC073592.8-201ENST00000624126 511 ntBASIC18.58■□□□□ 0.56
SOX1O00570 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.58■□□□□ 0.56
SOX1O00570 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SOX1O00570 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SOX1O00570 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX1O00570 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SOX1O00570 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SOX1O00570 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.58■□□□□ 0.56
SOX1O00570 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SOX1O00570 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms