Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN5O00501 SLC25A6P5-201ENST00000435663 894 ntBASIC18.6■□□□□ 0.57
CLDN5O00501 HNRNPDP1-201ENST00000439535 754 ntBASIC18.6■□□□□ 0.57
CLDN5O00501 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN5O00501 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN5O00501 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN5O00501 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN5O00501 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN5O00501 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CLDN5O00501 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN5O00501 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN5O00501 AC079776.2-201ENST00000641154 1609 ntBASIC18.6■□□□□ 0.57
CLDN5O00501 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN5O00501 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLDN5O00501 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN5O00501 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN5O00501 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN5O00501 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLDN5O00501 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN5O00501 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN5O00501 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.59■□□□□ 0.57
CLDN5O00501 KRT18P67-201ENST00000432816 1264 ntBASIC18.59■□□□□ 0.57
CLDN5O00501 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLDN5O00501 AC079776.4-201ENST00000511039 504 ntBASIC18.59■□□□□ 0.57
CLDN5O00501 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN5O00501 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN5O00501 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN5O00501 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN5O00501 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 AL355312.1-201ENST00000407115 2176 ntBASIC18.59■□□□□ 0.57
CLDN5O00501 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN5O00501 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 AC148477.5-201ENST00000625164 1645 ntBASIC18.59■□□□□ 0.57
CLDN5O00501 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLDN5O00501 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN5O00501 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN5O00501 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN5O00501 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.58■□□□□ 0.57
CLDN5O00501 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN5O00501 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.58■□□□□ 0.57
CLDN5O00501 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN5O00501 AC134043.2-201ENST00000624206 2238 ntBASIC18.58■□□□□ 0.57
CLDN5O00501 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.58■□□□□ 0.57
CLDN5O00501 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN5O00501 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN5O00501 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
CLDN5O00501 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN5O00501 HLA-A-201ENST00000376802 1334 ntBASIC18.58■□□□□ 0.57
CLDN5O00501 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN5O00501 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN5O00501 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 SPDYE21P-201ENST00000413323 827 ntBASIC18.58■□□□□ 0.56
CLDN5O00501 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN5O00501 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 AC018712.1-201ENST00000455767 687 ntBASIC18.58■□□□□ 0.56
CLDN5O00501 SCARNA2-201ENST00000458748 420 ntBASIC18.58■□□□□ 0.56
CLDN5O00501 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN5O00501 RNA5SP419-201ENST00000515908 135 ntBASIC18.58■□□□□ 0.56
CLDN5O00501 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN5O00501 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN5O00501 AC067852.2-201ENST00000590513 2313 ntBASIC18.58■□□□□ 0.56
CLDN5O00501 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN5O00501 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN5O00501 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN5O00501 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN5O00501 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms