Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.27■□□□□ 0.36
EIF3FO00303 AL358472.4-201ENST00000633140 710 ntBASIC17.27■□□□□ 0.36
EIF3FO00303 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EIF3FO00303 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EIF3FO00303 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.27■□□□□ 0.35
EIF3FO00303 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
EIF3FO00303 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EIF3FO00303 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
EIF3FO00303 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EIF3FO00303 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EIF3FO00303 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
EIF3FO00303 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
EIF3FO00303 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
EIF3FO00303 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.26■□□□□ 0.35
EIF3FO00303 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
EIF3FO00303 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.26■□□□□ 0.35
EIF3FO00303 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.26■□□□□ 0.35
EIF3FO00303 AP005901.3-202ENST00000581653 237 ntBASIC17.26■□□□□ 0.35
EIF3FO00303 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 NPAP1P7-201ENST00000613027 823 ntBASIC17.26■□□□□ 0.35
EIF3FO00303 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.26■□□□□ 0.35
EIF3FO00303 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.26■□□□□ 0.35
EIF3FO00303 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EIF3FO00303 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
EIF3FO00303 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
EIF3FO00303 SIRPAP1-201ENST00000448467 1770 ntBASIC17.25■□□□□ 0.35
EIF3FO00303 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.25■□□□□ 0.35
EIF3FO00303 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 ARMC10P1-201ENST00000313754 855 ntBASIC17.25■□□□□ 0.35
EIF3FO00303 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
EIF3FO00303 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
EIF3FO00303 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.25■□□□□ 0.35
EIF3FO00303 MIR1224-201ENST00000408193 85 ntBASIC17.25■□□□□ 0.35
EIF3FO00303 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 KRT17P6-201ENST00000453795 1220 ntBASIC17.25■□□□□ 0.35
EIF3FO00303 TOB2P1-201ENST00000469761 992 ntBASIC17.25■□□□□ 0.35
EIF3FO00303 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.25■□□□□ 0.35
EIF3FO00303 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 AC111152.3-201ENST00000569699 673 ntBASIC17.25■□□□□ 0.35
EIF3FO00303 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.25■□□□□ 0.35
EIF3FO00303 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
EIF3FO00303 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
EIF3FO00303 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
EIF3FO00303 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EIF3FO00303 AL023806.1-201ENST00000603994 1649 ntBASIC17.25■□□□□ 0.35
EIF3FO00303 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.25■□□□□ 0.35
EIF3FO00303 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
EIF3FO00303 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.24■□□□□ 0.35
EIF3FO00303 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.24■□□□□ 0.35
EIF3FO00303 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.24■□□□□ 0.35
EIF3FO00303 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EIF3FO00303 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
EIF3FO00303 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
EIF3FO00303 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms