Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 AP002383.4-201ENST00000442518 975 ntBASIC15.6■□□□□ 0.09
NPIPB4C9JG80 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPIPB4C9JG80 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 AC046185.3-201ENST00000623228 1824 ntBASIC15.59■□□□□ 0.09
NPIPB4C9JG80 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 AC091607.1-201ENST00000490318 1060 ntBASIC15.59■□□□□ 0.09
NPIPB4C9JG80 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 AD001527.2-201ENST00000622994 785 ntBASIC15.59■□□□□ 0.09
NPIPB4C9JG80 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPIPB4C9JG80 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.09
NPIPB4C9JG80 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 AC003669.1-201ENST00000334569 611 ntBASIC15.58■□□□□ 0.08
NPIPB4C9JG80 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 KRT17P6-201ENST00000453795 1220 ntBASIC15.58■□□□□ 0.08
NPIPB4C9JG80 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 KRT8P10-201ENST00000450021 1447 ntBASIC15.58■□□□□ 0.08
NPIPB4C9JG80 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 TP73-AS1-210ENST00000637775 1455 ntBASIC15.58■□□□□ 0.08
NPIPB4C9JG80 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NPIPB4C9JG80 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms