Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 AC104581.1-202ENST00000635932 2618 ntBASIC23.26■■□□□ 1.31
RTL1A6NKG5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 HLA-DQB1-201ENST00000374943 1656 ntBASIC23.26■■□□□ 1.31
RTL1A6NKG5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 AC027796.2-201ENST00000575326 344 ntBASIC23.26■■□□□ 1.31
RTL1A6NKG5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC23.26■■□□□ 1.31
RTL1A6NKG5 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTL1A6NKG5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 METTL21AP1-201ENST00000438852 635 ntBASIC23.25■■□□□ 1.31
RTL1A6NKG5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 AC004877.2-201ENST00000623941 599 ntBASIC23.25■■□□□ 1.31
RTL1A6NKG5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RTL1A6NKG5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
RTL1A6NKG5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 AC090164.3-201ENST00000610780 2143 ntBASIC23.24■■□□□ 1.31
RTL1A6NKG5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTL1A6NKG5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
RTL1A6NKG5 BCAR1-209ENST00000546196 1340 ntBASIC23.24■■□□□ 1.31
RTL1A6NKG5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL1A6NKG5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTL1A6NKG5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 REXO1L11P-201ENST00000620964 1927 ntBASIC23.23■■□□□ 1.31
RTL1A6NKG5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTL1A6NKG5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.23■■□□□ 1.31
RTL1A6NKG5 AC046185.3-201ENST00000623228 1824 ntBASIC23.22■■□□□ 1.31
RTL1A6NKG5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RTL1A6NKG5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RTL1A6NKG5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL1A6NKG5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL1A6NKG5 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.22■■□□□ 1.31
RTL1A6NKG5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.22■■□□□ 1.31
RTL1A6NKG5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.22■■□□□ 1.31
RTL1A6NKG5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTL1A6NKG5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
RTL1A6NKG5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC23.22■■□□□ 1.31
RTL1A6NKG5 AL596442.2-201ENST00000610240 980 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms