Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 AC026185.1-201ENST00000445748 174 ntBASIC12.45□□□□□ -0.42
LINC01546A6NGU7 B3GAT3P1-201ENST00000471720 806 ntBASIC12.45□□□□□ -0.42
LINC01546A6NGU7 AP002982.1-201ENST00000492365 877 ntBASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 AC080038.1-201ENST00000611274 1154 ntBASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LINC01546A6NGU7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 SLC29A4P1-201ENST00000398760 971 ntBASIC12.44□□□□□ -0.42
LINC01546A6NGU7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 WWOX-216ENST00000569818 525 ntBASIC12.44□□□□□ -0.42
LINC01546A6NGU7 MIR6786-201ENST00000616843 113 ntBASIC12.44□□□□□ -0.42
LINC01546A6NGU7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 AL662844.4-201ENST00000606367 2838 ntBASIC12.44□□□□□ -0.42
LINC01546A6NGU7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 AC132872.4-202ENST00000622924 2756 ntBASIC12.44□□□□□ -0.42
LINC01546A6NGU7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LINC01546A6NGU7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 AC006538.1-201ENST00000567905 1585 ntBASIC12.43□□□□□ -0.42
LINC01546A6NGU7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC01546A6NGU7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms