Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 CYP2T1P-202ENST00000641596 2535 ntBASIC16.41■□□□□ 0.22
CCDC160A6NGH7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 LYSMD4-203ENST00000378904 2122 ntBASIC16.41■□□□□ 0.22
CCDC160A6NGH7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 TERF1P5-201ENST00000477545 1207 ntBASIC16.41■□□□□ 0.22
CCDC160A6NGH7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 AC092068.3-201ENST00000587894 2016 ntBASIC16.41■□□□□ 0.22
CCDC160A6NGH7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC160A6NGH7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC160A6NGH7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.22
CCDC160A6NGH7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC160A6NGH7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC160A6NGH7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 TERF1P2-201ENST00000583350 1212 ntBASIC16.39■□□□□ 0.21
CCDC160A6NGH7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC160A6NGH7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms