Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 DDX43P3-201ENST00000441064 443 ntBASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 MIR4497-201ENST00000583208 89 ntBASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 AL596257.1-201ENST00000641463 2694 ntBASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 AL513477.1-201ENST00000602865 2407 ntBASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV6-7A0A0A0MS04 PCDHA1-201ENST00000378133 2726 ntBASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 ECEL1P3-201ENST00000427961 737 ntBASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 KRT18P65-201ENST00000439811 1286 ntBASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 TSPY15P-201ENST00000457163 923 ntBASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 KRT89P-201ENST00000620027 1478 ntBASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 REXO1L11P-201ENST00000620964 1927 ntBASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-7A0A0A0MS04 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 TMEM191A-211ENST00000637163 1067 ntBASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV6-7A0A0A0MS04 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.77□□□□□ -0.04
TRBV6-7A0A0A0MS04 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms