Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.09■□□□□ 0.49
FNDC3AQ9Y2H6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FNDC3AQ9Y2H6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 AC008687.5-201ENST00000593746 558 ntBASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 AC132938.6-201ENST00000623828 1655 ntBASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
FNDC3AQ9Y2H6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 AL353692.3-201ENST00000407031 1396 ntBASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 MINOS1P3-201ENST00000457048 203 ntBASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 AC093010.1-201ENST00000473625 1624 ntBASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FNDC3AQ9Y2H6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
FNDC3AQ9Y2H6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms