Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 AC093909.1-201ENST00000504731 1122 ntBASIC18.34■□□□□ 0.53
SCML2Q9UQR0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 MIR7706-201ENST00000613747 67 ntBASIC18.34■□□□□ 0.53
SCML2Q9UQR0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 LINC00304-203ENST00000565008 1864 ntBASIC18.34■□□□□ 0.53
SCML2Q9UQR0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCML2Q9UQR0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCML2Q9UQR0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 LAGE3P1-201ENST00000425356 484 ntBASIC18.33■□□□□ 0.52
SCML2Q9UQR0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 AL049840.3-201ENST00000602669 611 ntBASIC18.33■□□□□ 0.52
SCML2Q9UQR0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCML2Q9UQR0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 AC139887.3-201ENST00000568585 713 ntBASIC18.32■□□□□ 0.52
SCML2Q9UQR0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SCML2Q9UQR0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 BX640515.1-201ENST00000617215 977 ntBASIC18.31■□□□□ 0.52
SCML2Q9UQR0 AL589182.2-201ENST00000619332 1049 ntBASIC18.31■□□□□ 0.52
SCML2Q9UQR0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.31■□□□□ 0.52
SCML2Q9UQR0 AC008735.5-201ENST00000623544 497 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms