Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 AC132872.4-202ENST00000622924 2756 ntBASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
COMMD3Q9UBI1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 GPAT2P1-201ENST00000444924 1672 ntBASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COMMD3Q9UBI1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 SLC29A4P1-201ENST00000398760 971 ntBASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 AC063926.3-201ENST00000624734 5658 ntBASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
COMMD3Q9UBI1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms