Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 AL135744.1-201ENST00000565098 629 ntBASIC18.56■□□□□ 0.56
CHD7Q9P2D1 STK25P1-201ENST00000585406 838 ntBASIC18.56■□□□□ 0.56
CHD7Q9P2D1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD7Q9P2D1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 ARSEP1-201ENST00000420443 635 ntBASIC18.55■□□□□ 0.56
CHD7Q9P2D1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD7Q9P2D1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 AC107890.1-201ENST00000422478 521 ntBASIC18.54■□□□□ 0.56
CHD7Q9P2D1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.54■□□□□ 0.56
CHD7Q9P2D1 AC103564.2-201ENST00000432853 1299 ntBASIC18.54■□□□□ 0.56
CHD7Q9P2D1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 LINC02560-201ENST00000596379 459 ntBASIC18.54■□□□□ 0.56
CHD7Q9P2D1 GGTLC5P-201ENST00000617623 998 ntBASIC18.54■□□□□ 0.56
CHD7Q9P2D1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 BASP1P1-201ENST00000430708 665 ntBASIC18.54■□□□□ 0.56
CHD7Q9P2D1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD7Q9P2D1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 AC140658.5-201ENST00000438532 169 ntBASIC18.53■□□□□ 0.56
CHD7Q9P2D1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD7Q9P2D1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD7Q9P2D1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms