Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 HOXB1-202ENST00000577092 1414 ntBASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CALCOCO1Q9P1Z2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CALCOCO1Q9P1Z2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 HOMER2P1-201ENST00000455653 964 ntBASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 AL359075.1-203ENST00000462729 1002 ntBASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 GCSHP2-201ENST00000560971 527 ntBASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 NEK4P2-201ENST00000580004 1012 ntBASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 AC140113.3-201ENST00000605663 199 ntBASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CALCOCO1Q9P1Z2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 AL121956.5-201ENST00000625261 221 ntBASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 AC092850.2-201ENST00000623821 2697 ntBASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CALCOCO1Q9P1Z2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CALCOCO1Q9P1Z2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms