Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 AL138688.1-201ENST00000624851 1594 ntBASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 TSPY12P-201ENST00000421279 868 ntBASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 AL137013.1-201ENST00000432946 1228 ntBASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 DDX43P3-201ENST00000441064 443 ntBASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 AC005363.2-201ENST00000618631 242 ntBASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 LINC01451-201ENST00000623792 534 ntBASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.86□□□□□ -0.03
KCNIP1Q9NZI2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 BX664615.1-201ENST00000443558 458 ntBASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
KCNIP1Q9NZI2 HLA-J-201ENST00000462773 1622 ntBASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
KCNIP1Q9NZI2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms