Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 AL031133.1-201ENST00000406807 723 ntBASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 AC097488.1-201ENST00000507834 756 ntBASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 MIR3180-5-201ENST00000583743 153 ntBASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 PCDH8P1-201ENST00000428983 2773 ntBASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCM2LQ9NUG4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CCM2LQ9NUG4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCM2LQ9NUG4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCM2LQ9NUG4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 INGX-201ENST00000359239 846 ntBASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AC009947.2-201ENST00000444014 672 ntBASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 B3GAT3P1-201ENST00000471720 806 ntBASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 HOXB1-202ENST00000577092 1414 ntBASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 DGCR10-201ENST00000609839 495 ntBASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 FAM87A-204ENST00000613235 858 ntBASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 LINC01451-201ENST00000623792 534 ntBASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCM2LQ9NUG4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 AC026396.1-201ENST00000419388 421 ntBASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 AC139887.4-201ENST00000607877 719 ntBASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 AP000550.4-202ENST00000639755 178 ntBASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCM2LQ9NUG4 AC132938.6-201ENST00000623828 1655 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms