Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTN4Q9NQC3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.9■□□□□ 0.94
RTN4Q9NQC3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 AC083880.1-201ENST00000608266 535 ntBASIC20.9■□□□□ 0.94
RTN4Q9NQC3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTN4Q9NQC3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTN4Q9NQC3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTN4Q9NQC3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
RTN4Q9NQC3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.89■□□□□ 0.93
RTN4Q9NQC3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.88■□□□□ 0.93
RTN4Q9NQC3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 CICP13-201ENST00000422015 2789 ntBASIC20.88■□□□□ 0.93
RTN4Q9NQC3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 SNX18-202ENST00000343017 3140 ntBASIC20.88■□□□□ 0.93
RTN4Q9NQC3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.88■□□□□ 0.93
RTN4Q9NQC3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.87■□□□□ 0.93
RTN4Q9NQC3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms