Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 AC091607.1-201ENST00000490318 1060 ntBASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 AL591684.3-201ENST00000605187 298 ntBASIC17.52■□□□□ 0.4
POLR1BQ9H9Y6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.52■□□□□ 0.39
POLR1BQ9H9Y6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR1BQ9H9Y6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.52■□□□□ 0.39
POLR1BQ9H9Y6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR1BQ9H9Y6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR1BQ9H9Y6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR1BQ9H9Y6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
POLR1BQ9H9Y6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 AC126763.1-201ENST00000552015 2118 ntBASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 AC073592.3-201ENST00000625118 1834 ntBASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR1BQ9H9Y6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ANO7L1-203ENST00000602586 1720 ntBASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 SLC25A1P1-201ENST00000528351 927 ntBASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
POLR1BQ9H9Y6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms