Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TDRD3Q9H7E2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TDRD3Q9H7E2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TDRD3Q9H7E2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.83■□□□□ 0.93
TDRD3Q9H7E2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TDRD3Q9H7E2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TDRD3Q9H7E2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 AC025580.3-201ENST00000617932 1424 ntBASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 RHOQP3-201ENST00000437982 621 ntBASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 RFPL4AP1-201ENST00000530883 850 ntBASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 GGTLC5P-201ENST00000617623 998 ntBASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
TDRD3Q9H7E2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 CYMP-203ENST00000474680 1263 ntBASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 AC002558.1-201ENST00000488906 803 ntBASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
TDRD3Q9H7E2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 AC093503.3-201ENST00000624917 2352 ntBASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDRD3Q9H7E2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.79■□□□□ 0.92
TDRD3Q9H7E2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDRD3Q9H7E2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TDRD3Q9H7E2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDRD3Q9H7E2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDRD3Q9H7E2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.79■□□□□ 0.92
TDRD3Q9H7E2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms