Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 AC073621.1-201ENST00000392730 636 ntBASIC19.03■□□□□ 0.64
NXF3Q9H4D5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 AC002558.1-201ENST00000488906 803 ntBASIC19.03■□□□□ 0.64
NXF3Q9H4D5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 AC034105.1-201ENST00000563488 319 ntBASIC19.03■□□□□ 0.64
NXF3Q9H4D5 AC006557.2-201ENST00000592985 1240 ntBASIC19.03■□□□□ 0.64
NXF3Q9H4D5 AL356488.2-201ENST00000602755 427 ntBASIC19.03■□□□□ 0.64
NXF3Q9H4D5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NXF3Q9H4D5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 REXO1L11P-201ENST00000620964 1927 ntBASIC19.02■□□□□ 0.64
NXF3Q9H4D5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 STK19B-204ENST00000512515 211 ntBASIC19.02■□□□□ 0.64
NXF3Q9H4D5 UNC93B6-202ENST00000528242 690 ntBASIC19.02■□□□□ 0.64
NXF3Q9H4D5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 Z83851.2-201ENST00000609564 659 ntBASIC19.02■□□□□ 0.64
NXF3Q9H4D5 AL589182.2-201ENST00000619332 1049 ntBASIC19.02■□□□□ 0.64
NXF3Q9H4D5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NXF3Q9H4D5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NXF3Q9H4D5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NXF3Q9H4D5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NXF3Q9H4D5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NXF3Q9H4D5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NXF3Q9H4D5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NXF3Q9H4D5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.02■□□□□ 0.63
NXF3Q9H4D5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 ELK2BP-201ENST00000415014 1224 ntBASIC19.01■□□□□ 0.63
NXF3Q9H4D5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 SIGLEC30P-201ENST00000455569 941 ntBASIC19.01■□□□□ 0.63
NXF3Q9H4D5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 AC009336.1-201ENST00000608941 1553 ntBASIC19.01■□□□□ 0.63
NXF3Q9H4D5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NXF3Q9H4D5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19■□□□□ 0.63
NXF3Q9H4D5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NXF3Q9H4D5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19■□□□□ 0.63
NXF3Q9H4D5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19■□□□□ 0.63
NXF3Q9H4D5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NXF3Q9H4D5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19■□□□□ 0.63
NXF3Q9H4D5 AC005104.2-201ENST00000427818 678 ntBASIC19■□□□□ 0.63
NXF3Q9H4D5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19■□□□□ 0.63
NXF3Q9H4D5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms