Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 IGHV3-65-201ENST00000523210 341 ntBASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 LINC00628-201ENST00000628516 1289 ntBASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE2OQ9C0C9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 AC120498.9-201ENST00000339021 3867 ntBASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 GAPDHP21-201ENST00000450301 1010 ntBASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 KRT19P2-202ENST00000557173 1012 ntBASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 AC008667.4-201ENST00000607370 168 ntBASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBE2OQ9C0C9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AC007967.3-201ENST00000434308 558 ntBASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AL390955.2-201ENST00000603032 514 ntBASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AC105339.1-204ENST00000636249 355 ntBASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 SIGLEC16-201ENST00000599858 1437 ntBASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE2OQ9C0C9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE2OQ9C0C9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2OQ9C0C9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2OQ9C0C9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE2OQ9C0C9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2OQ9C0C9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE2OQ9C0C9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms